PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma153g00280.1
Common NameZOSMA_153G00280
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 410aa    MW: 45198.1 Da    PI: 6.9639
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma153g00280.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08238285455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++iN ++  L+el+P +    +k    a +L + +++++sLq
  Zosma153g00280.1 238 SHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 285
                       8*************************9....888999999999999999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.52E-8232289No hitNo description
SuperFamilySSF474594.06E-15232303IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-14234303IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.519234284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-6238285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-8240290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MEQSVAADGG SGNSGDFSHV HHHHHREISE TLRFQEEIQS LIRENLLELD PETDGGANNS  60
SSFTALLGLP PNQAMELLHP PHQLSHHHNH YRHQEIVPTT STLEARRSVV PNEYLQFRCS  120
PTFPSNVALV ERAARYSVFA SEGSSSPETS VVPSNSENNS SPKVKCEPAD DSDLKSPPKQ  180
KRANGKRKPS EKCVKPTKRY GKKSKNGGND VGDKKDGGDD EKPPYVHVRA RRGQATDSHS  240
LAERARREKI NARMKLLQEL VPGCNKISGT ALVLDEIINH VQSLQRQVEF LSMRLAAVNP  300
RIDFGGIESF LPSDNATVTR CNNGGVGLVA SIWPDIQVDG GGVRPQQQQI WQVDLLPSQQ  360
QTSSSSSLWD RDDNHQNQHH GFINHGPSLI GLDYTNPVSV ETNQLKTEM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010913937.11e-113PREDICTED: transcription factor bHLH48-like isoform X2
SwissprotQ8VZ022e-68BH048_ARATH; Transcription factor bHLH48
TrEMBLA0A0K9PVY60.0A0A0K9PVY6_Z
STRINGGSMUA_Achr4P19330_0011e-102(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69322735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42300.13e-61bHLH family protein